Is the database structure that different in 3.5.x that you can't access the 3.0.7 database or clone it and use that one while you make the modifications?
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and you cant upgrade to 3.5 and keep your old hacks
This is a given...I know that you can't use 3.0.7 hacks in 3.5.x. My question had to do with a systematic way of documenting changes and hacks and moving them over once they're released.