The secondary header is a static html widget with plain text in it. I have no idea why it isn't showing up.
Ok so I change the layout of content.php and everything works EXCEPT the secondary header isn't showing

The other widgets show just fine and the secondary footer is hidden like it should be.
On my test site everything looks great and works as it's intended. See screen shot, only difference is I'm using the menu widget as a placeholder for the rss feeds widget. Oh and the avatars aren't showing (I deleted them

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Forgot to mention that I have created a completely default style and the secondary header still doesn't show

Both the test site and the live site are on 4.1.12 pl 3.