Search bar missing

[davit1979]

Hello,
Our site got hacked, running vbulletin 4.2.2, requiring us to reupload all the vbulletin files and run upgrade as well as delete our custom theme and reinstall it. Everything went without a hitch, expect there are two weird issues.

1) Search bar gone MIA. I have grown quite attached to the damn thing, and it is gone... I have no idea how to get it back and where to look for it....

2) Notification area for the private message is quite useless now, when you click the arrow down, only thing it shows is a white box, once you mouse over it, it highlights mustard yellow, with text being barely readable. Where do I fix that???

3) I have tried to contact the designer of the theme, but he is MIA just like my search bar. I am suspecting they are in cahoots.

Please help.
Screenshots included, one with missing bar and the broken notification filed, the other one where search bar still loved me.
Thank you.

-Davit