I had a similar issue after a fellow administrator didn't remove all the tables when uninstalling.
The easiest thing to do is to manipulate the contents of the mysql-schema.php file so that the uninstall and revert entries are actually called upon install and the install entries are ignored. This way you can go right through to step three when the 'install' actually drops the tables.
Upload the original mysql-schema.php file and run the install again, you should find you have a good install.
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