Trana,
google sitemap submission should not affect indexing/crawling state of pages which are not included in sitemap. You will find more details here:
https://www.google.com/webmasters/si...cs/en/faq.html
KarateKid,
we have no known issues with memory allocation in the recent version of vBSEO Sitemap Generator (except of your case, of course - and we will follow up with it

)
If someone else have the same problem, please let us know.
Zia,
if you are using vBSEO, you just need to turn on "vBSEO Installed" option for Sitemap Generator. It will create URLs accordingly.
With "vBSEO Installed" option turned off, original (dynamic) vB URLs are added to sitemap.