Hey, I figured it out, at least for the MEMBERINFO and modifyoptions templates.
Go into the Find Updated Templates section under Style & Templates in admincp.
Find
Code:
<td class="smallfont" valign="bottom" align="$stylevar[right]">
there will be a second identical line just below it, followed by the DONATIONS section.
Just delete one of the duplicate lines. MEMBERINFO no longer is showing as needing modification.
For the modifyoptions template there is also a duplicate line.
Find
Code:
<if condition="$show['reputationoption']">
and delete the duplicate.
/edit - the other two templates appear unchanged. I just reverted them without any problems thus far.