I ran into the same issues with the one thread repeating and repeating....What I did was restored both DB's back to normal and then turned magic quotes off. Once that was done I restarted the process of the merge. I successfully merged 3 sites together. Site 1:7k Users and 290k posts; Site 2: 11k Users and 410k posts; Site 3: 8300 Users and 330k posts.
All went well on the test DB's and I will be doing this on the live forums later this weekend. The only thing I wish it would do is the avatars. Try telling close to 20k users that they need to redo their avatars. I am dreading that.
Other than that it is a great Script. Thanks Julian for the help a week ago.
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