I use MySQL command line with the 7zip Command Line tool, so I can setup Batch files to automatically backup my forum database and my entire website directory, and after it backs up both of them, the batch file compresses them with 7zip and stores them on another drive that is setup just for storing backups.
However, my server that is running my web server is Windows Server 2008R2, so Im not sure how you would do it on a Linux box.
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