I found a easy and painless way to fix the css mess, hopefully it will help anyone wating to customize it.
I downloaded a fresh new properly formatted
http://code.jquery.com/mobile/1.0.1/...bile-1.0.1.css and placed it in the clientscript/jquery folder and then edited the file as needed, (all i wanted was to change the colors in the header bar ui-bar-b) it worked perfectly and is easy to read and edit at will now.