How is it that these mods are displayed in the style? If you modified a template to add the contents, then just remove that from the template in your new style. If they are added via a plugin/hook into a template hook, then you can probably remove the template hook from your new style.
The best place to get an answer is probably to post in each of the modification threads to get an answer from the author about the easiest way to go about this.
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