This is not as easy as it may look on first sight. You say that at 1 point you still had the attachments on the file system, but emptied the attachment table in the database. If so, then it will be very hard to rebuild, as you have lost the relation between the attachment-id in the filename and the attachments-id as aspected by vBulletin.
Posting at vb.com or a support ticket might be your best option.
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